Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 411188

Identification

Species:
Populus trichocarpa
Gene model
411188
Description
gw1.II.2523.1
Family
bZIP

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

322281 Score: 1

Arabidopsis thaliana

AT2G46270.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g49420.1 Score: 1

Populus trichocarpa

244814 Score: 1
411188 Score: 1

Sorghum bicolor

4769042 Score: 1

Expression data

Expressed Sequence Tags

At.19966
Arabidopsis thaliana GBF3 (G-BOX BINDING FACTOR 3); transcription factor (GBF3) mRNA, complete cds /cds=p(283,1431) /gb=NM_130190
Mtr.14251
EST647221 HOGA Medicago truncatula cDNA clone HOGA-31M5, mRNA sequence /clone=HOGA-31M5 /gb=CB894429
Mtr.18614
EST509031 HOGA Medicago truncatula cDNA clone pHOGA-16H2 5' end, mRNA sequence /clone=pHOGA-16H2 /clone_end=5' /gb=BG647412
Mtr.2071
EST637634 MTUS Medicago truncatula cDNA clone MTUS-20B10, mRNA sequence /clone=MTUS-20G3 /gb=CA919916
Pba.7625
WS02529.B21_H02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_H02 3', mRNA sequence /clone=WS02529_H02 /clone_end=3' /gb=DT485885
Pth.7625
WS02529.B21_H02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_H02 3', mRNA sequence /clone=WS02529_H02 /clone_end=3' /gb=DT485885

Domain Architecture

MFMR PF07777 411188
DomainStartEndBit scoreE-value
MFMR1187298.11.7e-86
bZIP_127233585.41.8e-22
bZIP_227232645.91.4e-10

Sequences