Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 414016

Identification

Species:
Populus trichocarpa
Gene model
414016
Description
gw1.III.1119.1
Family
BES1
3D structure (top 5)
1WDP 1B1Y 1FA2 1VEM 1KWG
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

356484 Score: 1

Arabidopsis thaliana

AT5G45300.1 Score: 1
AT5G45300.2 Score: 0.982

Oryza sativa subsp. japonica

LOC_Os02g03690.1 Score: 1

Vitis vinifera

GSVIVP00001210001 Score: 1

Zea mays

GRMZM2G069486_P02 Score: 1

Expression data

Expressed Sequence Tags

At.30019
Arabidopsis thaliana At5g45300 mRNA for putative beta-amylase, complete cds, clone: RAFL16-68-D16 /cds=p(24,2093) /gb=AK117140
At.68473
Arabidopsis thaliana BAM2/BMY9 (BETA-AMYLASE 2); beta-amylase (BAM2/BMY9) mRNA, complete cds /cds=p(103,1731) /gb=NM_116273
Mtr.8047
EST669622 MTUS Medicago truncatula cDNA clone MTUS-13H1, mRNA sequence /clone=MTUS-13H1 /gb=CF068901
Os.49427
Oryza sativa Japonica Group cDNA clone:J013000A07, full insert sequence /gb=AK120049
Os.5640
Oryza sativa Japonica Group cDNA clone:J023048N01, full insert sequence /gb=AK070300
Ppa.573
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_107034) mRNA, complete cds /cds=p(292,1950) /gb=XM_001770051

Domain Architecture

DUF822 PF05687 414016
DomainStartEndBit scoreE-value
DUF82256213206.85.2e-59
Glyco_hydro_142266342374.4e-68

Sequences