Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 419224

Identification

Species:
Populus trichocarpa
Gene model
419224
Description
gw1.VIII.652.1
Family
SET
3D structure (top 5)
2F69 2PB7 1H3I 2R3A 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.12115
Arabidopsis thaliana SUVH2 (SU(VAR)3-9 HOMOLOG 2) (SUVH2) mRNA, complete cds /cds=p(115,2070) /gb=NM_128889
At.3118
Arabidopsis thaliana SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding (SUVH9) mRNA, complete cds /cds=p(400,2352) /gb=NM_001036548
Os.26478
Oryza sativa Japonica Group cDNA clone:J013097K17, full insert sequence /cds=p(299,2353) /gb=AK067172
Os.52522
Oryza sativa Japonica Group cDNA clone:J013110N01, full insert sequence /gb=AK067640

Domain Architecture

YDG_SRA PF02182 419224
DomainStartEndBit scoreE-value
YDG_SRA5161310.72.8e-90
Pre-SET191289113.46.7e-31
SET291446129.88.1e-36

Sequences