Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 419466

Identification

Species:
Populus trichocarpa
Gene model
419466
Description
gw1.VIII.894.1
Family
zf-HD
3D structure (top 5)
1WH7 2R5Y 1WH5 1AU7 3D1N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.50017
Arabidopsis thaliana ATHB29/ZFHD1 (ZINC FINGER HOMEODOMAIN 1); DNA binding / transcription activator/ transcription factor (ATHB29/ZFHD1) mRNA, complete cds /cds=p(1,729) /gb=NM_105628
Vvi.17484
S1G04262 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G04262, mRNA sequence /clone=S1G04262 /gb=EE076216
Vvi.6894
WIN0510.C21_B19 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0510_B19 3', mRNA sequence /clone=WIN0510_B19 /clone_end=3' /gb=EC935686

Domain Architecture

ZF-HD_dimer PF04770 419466
DomainStartEndBit scoreE-value
ZF-HD_dimer160131.72.1e-36

Sequences