Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 422771

Identification

Species:
Populus trichocarpa
Gene model
422771
Description
gw1.XII.1231.1
Family
Pseudo ARR-B
3D structure (top 5)
1W25 2AYX 1KGS 2QVG 1YIO
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

910487 Score: 1

Arabidopsis thaliana

AT5G24470.1 Score: 1

Expression data

Expressed Sequence Tags

Hv.21000
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf75k13, mRNA sequence /gb=AK250331
Mtr.19448
MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565
Os.12795
Oryza sativa Japonica Group cDNA clone:J013001E13, full insert sequence /gb=AK120059
Os.58539
Oryza sativa Japonica Group cDNA clone:J023077E22, full insert sequence /gb=AK121136
Pba.8004
WS02529.BR_D03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_D03 5', mRNA sequence /clone=WS02529_D03 /clone_end=5' /gb=DT480537
Pba.9585
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Pth.1123
WS02516.B21.1_C04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02516_C04 3', mRNA sequence /clone=WS02516_C04 /clone_end=3' /gb=CV242823
Pth.16941
WS01229.BR_H11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_H11 5', mRNA sequence /clone=WS01229_H11 /clone_end=5' /gb=DT473373
Pth.8004
WS02529.BR_D03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_D03 5', mRNA sequence /clone=WS02529_D03 /clone_end=5' /gb=DT480537
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

Domain Architecture

Response_reg PF00072 422771
DomainStartEndBit scoreE-value
Response_reg3214984.33.8e-22
CCT49654083.47.3e-22

Sequences