Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 437670

Identification

Species:
Selaginella moellendorffii
Gene model
437670
Description
estExt_fgenesh2_pg.C_00995
Family
SBP
3D structure (top 5)
1UL4 1UL5 1WJ0
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483883 Score: 1

Arabidopsis thaliana

AT2G47070.1 Score: 1

Chlorella sp. NC64A

49863 Score: 1

Carica papaya

evm.TU.supercontig_146.33 Score: 1

Chlamydomonas reinhardtii

195928 Score: 1

Coccomyxa sp. C-169

82228 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g40260.1 Score: 1

Populus trichocarpa

798319 Score: 1

Sorghum bicolor

5059084 Score: 1

Vitis vinifera

GSVIVP00028195001 Score: 1

Zea mays

GRMZM2G169270_P01 Score: 1

Expression data

Expressed Sequence Tags

Mtr.17460
NF060C08DT1F1065 Drought Medicago truncatula cDNA clone NF060C08DT 5', mRNA sequence /clone=NF060C08DT /clone_end=5' /gb=BF634536
Os.10618
Oryza sativa (japonica cultivar-group) Os08g0513700 (Os08g0513700) mRNA, complete cds /cds=p(1,3315) /gb=NM_001068762
Ppa.19798
Physcomitrella patens SBP-domain protein 12 mRNA, complete cds /cds=p(69,1331) /gb=EF016496
Ppa.9665
Physcomitrella patens mRNA for squamosa promoter binding protein 2 (SBP2 gene) /cds=p(168,936) /gb=AJ968403

Domain Architecture

SBP PF03110 437670
DomainStartEndBit scoreE-value
SBP73151178.42.1e-50

Sequences