Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 445108

Identification

Species:
Selaginella moellendorffii
Gene model
445108
Description
estExt_fgenesh2_pg.C_520130
Family
SET
3D structure (top 5)
2RFI 1H3I 2W5Y 3H6L 3BO5
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

902198 Score: 1

Arabidopsis thaliana

AT2G31650.1 Score: 1

Carica papaya

evm.TU.supercontig_50.131 Score: 1

Chlamydomonas reinhardtii

172711 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g04890.1 Score: 1

Physcomitrella patens

197069 Score: 1

Populus trichocarpa

755956 Score: 1

Sorghum bicolor

4789006 Score: 1

Vitis vinifera

GSVIVP00005671001 Score: 1

Zea mays

GRMZM2G013794_P01 Score: 1

Expression data

Expressed Sequence Tags

Pba.7487
WS02530.B21_M18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_M18 3', mRNA sequence /clone=WS02530_M18 /clone_end=3' /gb=DT486369
Pth.7487
WS02530.B21_M18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_M18 3', mRNA sequence /clone=WS02530_M18 /clone_end=3' /gb=DT486369

Domain Architecture

PWWP PF00855 445108
DomainStartEndBit scoreE-value
PWWP34641931.53.5e-06
FYRN48754040.56.8e-09
FYRC54563150.27.8e-12
SET8751005152.31.4e-42

Sequences