Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 44798

Identification

Species:
Coccomyxa sp. C-169
Gene model
44798
Description
estExt_Genewise1Plus.C_180205
Family
GNAT
3D structure (top 5)
2OB0 2CNT 1TIQ 2DXQ 3D3S
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

887467 Score: 1

Arabidopsis thaliana

AT1G03150.1 Score: 1

Cyanidioschyzon merolae

CML218C Score: 1

Chlorella sp. NC64A

48918 Score: 1

Carica papaya

evm.TU.supercontig_52.40 Score: 1

Micromonas pusilla CCMP1545

32793 Score: 1

Micromonas sp. RCC299

108153 Score: 1

Ostreococcus lucimarinus

37367 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g49230.1 Score: 1

Ostreococcus tauri

8349 Score: 1

Physcomitrella patens

108609 Score: 1

Populus trichocarpa

818659 Score: 1

Sorghum bicolor

5048342 Score: 1

Selaginella moellendorffii

90855 Score: 1

Vitis vinifera

GSVIVP00023724001 Score: 1

Zea mays

GRMZM2G037120_P01 Score: 1
GRMZM2G123159_P01 Score: 1
GRMZM2G123159_P03 Score: 1

Expression data

Expressed Sequence Tags

At.11121
Arabidopsis thaliana GCN5-related N-acetyltransferase (GNAT) family protein (AT1G03150) mRNA, complete cds /cds=p(48,572) /gb=NM_100197
Hv.23803
HVSMEn0005I15f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005I15f, mRNA sequence /clone=HVSMEn0005I15f /gb=BI956826
Mtr.7016
MTYCI66TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV255253
Os.22588
CT850168 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCPI030P02, mRNA sequence /clone=OSIGCPI030P02 /gb=CT850168
Pba.11464
WS02535.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_J08 3', mRNA sequence /clone=WS02535_J08 /clone_end=3' /gb=DT488127
Pth.11464
Populus trichocarpa clone WS0118_N03 unknown mRNA /cds=p(83,607) /gb=EF146515
Vca.8000
CBHO22920.fwd CBHO Volvox carteri f. nagariensis female Eve10 (asexuall, 2-4 cell stage, 32-128 cell stage, inversion) Volvox carteri f. nagariensis cDNA clone CBHO22920 5', mRNA sequence /clone=CBHO22920 /clone_end=5' /gb=FD881812
Vvi.7720
WIN1148.C21_G20 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1148_G20 3', mRNA sequence /clone=WIN1148_G20 /clone_end=3' /gb=EC993445

Domain Architecture

Acetyltransf_1 PF00583 44798
DomainStartEndBit scoreE-value
Acetyltransf_14712862.21.9e-15

Sequences