Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 470218

Identification

Species:
Arabidopsis lyrata
Gene model
470218
Description
fgenesh2_kg.1__172__AT1G02580.1
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G02580.1 Score: 1

Expression data

Expressed Sequence Tags

At.10786
Arabidopsis thaliana MEDEA (MEA) mRNA, complete cds /cds=p(14,2083) /gb=AF060485
At.3858
Arabidopsis thaliana EZA1 (SWINGER); transcription factor (EZA1) mRNA, complete cds /cds=p(94,2664) /gb=NM_116433
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Sbi.7196
POL1_41_A10.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_A10_A002 5', mRNA sequence /clone=POL1_41_A10_A002 /clone_end=5' /gb=CF487051 /gi=34515920

Domain Architecture

SET PF00856 470218
DomainStartEndBit scoreE-value
SET521648167.73.4e-47

Sequences