Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 472211

Identification

Species:
Arabidopsis lyrata
Gene model
472211
Description
fgenesh2_kg.1__2165__AT1G19860.1
Family
C3H

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G19860.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g56750.1 Score: 1

Physcomitrella patens

229274 Score: 1

Populus trichocarpa

206268 Score: 1

Sorghum bicolor

4985657 Score: 1

Selaginella moellendorffii

437914 Score: 1

Vitis vinifera

GSVIVP00014464001 Score: 1

Zea mays

GRMZM2G046968_P01 Score: 1

Expression data

Expressed Sequence Tags

At.41731
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT1G19860) mRNA, complete cds /cds=p(337,1578) /gb=NM_101841
At.71838
BX836279 Arabidopsis thaliana Hormone Treated Callus Col-0 Arabidopsis thaliana cDNA clone GSLTPGH94ZA08 3PRIM, mRNA sequence /clone=GSLTPGH94ZA08 /clone_end=3' /gb=BX836279
Hv.20206
HU13O08r HU Hordeum vulgare subsp. vulgare cDNA clone HU13O08 5-PRIME, mRNA sequence /clone=HU13O08 /clone_end=5' /gb=CA009355

Domain Architecture

zf-CCCH PF00642 472211
DomainStartEndBit scoreE-value
zf-CCCH35538121.90.0019

Sequences