Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4749000

Identification

Species:
Sorghum bicolor
Gene model
4749000
Description
estExt_Genewise1.C_chr_29138
Family
CAMTA
3D structure (top 5)
1N11 2AJA 2VGE 1OY3 2FO1
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

355148 Score: 1

Arabidopsis thaliana

AT3G16940.1 Score: 1

Carica papaya

evm.TU.supercontig_929.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g30774.1 Score: 1

Populus trichocarpa

225855 Score: 1

Vitis vinifera

GSVIVP00033115001 Score: 1

Zea mays

GRMZM2G032336_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.20542
HVSMEg0001B12f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0001B12f, mRNA sequence /clone=HVSMEg0001B12f /gb=BG342881
Mtr.10997
EST529455 GPOD Medicago truncatula cDNA clone pGPOD-1P10 5' end, mRNA sequence /clone=pGPOD-1P10 /clone_end=5' /gb=BI308045
Os.88422
Oryza sativa Japonica Group cDNA clone:J023073E17, full insert sequence /gb=AK070976
Sbi.18562
WOUND1_58_E03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_58_E03_A002 5', mRNA sequence /clone=WOUND1_58_E03_A002 /clone_end=5' /gb=CN148769 /gi=45990085
Vvi.10386
CAB20006_IVa_Ra_B08 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20006_IVa_Ra_B08 3', mRNA sequence /clone=CAB20006_IVa_Ra_B08 /clone_end=3' /gb=CF210619
Vvi.12131
S2B11647 Buds (VvS2) Vitis vinifera cDNA clone S2B11647, mRNA sequence /clone=S2B11647 /gb=EE078343

Domain Architecture

CG-1 PF03859 4749000
DomainStartEndBit scoreE-value
CG-130148261.71.7e-75
Ank60763942.41.7e-09
IQ77479419.90.011
IQ797817260.00015
IQ87889821.20.0043

Sequences