Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4762440

Identification

Species:
Sorghum bicolor
Gene model
4762440
Description
estExt_Genewise1.C_chr_67871
Family
CSD
3D structure (top 5)
1H95 1MJC 3CAM 1C9O 2K5N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os08g03520.1 Score: 1

Populus trichocarpa

754616 Score: 1

Selaginella moellendorffii

186937 Score: 1

Vitis vinifera

GSVIVP00036773001 Score: 1

Expression data

Expressed Sequence Tags

At.19464
Arabidopsis thaliana cold-shock DNA-binding family protein (AT2G17870) mRNA, complete cds /cds=p(50,955) /gb=NM_127341
Hv.22816
HVSMEn0005B12f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005B12f, mRNA sequence /clone=HVSMEn0005B12f /gb=BI956744
Os.4724
Oryza sativa Japonica Group cDNA clone:J023061H10, full insert sequence /gb=AK070711
Os.54054
Oryza sativa Japonica Group cDNA, clone: J100044F18, full insert sequence /gb=AK243227

Domain Architecture

CSD PF00313 4762440
DomainStartEndBit scoreE-value
CSD572126.77.3e-35
zf-CCHC10211937.74.7e-08
zf-CCHC14115837.65e-08

Sequences