Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 476894

Identification

Species:
Arabidopsis lyrata
Gene model
476894
Description
fgenesh2_kg.2__2024__AT1G77300.1
Family
SET
3D structure (top 5)
1MVH 3H6L 2R3A 1ML9 2RFI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G77300.1 Score: 1

Carica papaya

evm.TU.supercontig_26.317 Score: 1

Vitis vinifera

GSVIVP00015453001 Score: 1

Expression data

Expressed Sequence Tags

At.34505
Arabidopsis thaliana EFS (EARLY FLOWERING IN SHORT DAYS) (EFS) mRNA, complete cds /cds=p(1,5292) /gb=NM_106379
Hv.30447
HX11F15r HX Hordeum vulgare subsp. vulgare cDNA clone HX11F15 5-PRIME, mRNA sequence /clone=HX11F15 /clone_end=5' /gb=CA031864
Ppa.21211
Physcomitrella patens subsp. patens predicted protein (SDG1547) mRNA, complete cds /cds=p(1,5148) /gb=XM_001757603

Domain Architecture

zf-CW PF07496 476894
DomainStartEndBit scoreE-value
zf-CW86391180.65.7e-21
SET10201150187.24.6e-53

Sequences