Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4769352

Identification

Species:
Sorghum bicolor
Gene model
4769352
Description
estExt_Genewise1.C_chr_100134
Family
HB
3D structure (top 5)
2DMN 1B72 1X2N 1DU6 1PUF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

493837 Score: 1

Arabidopsis thaliana

AT5G41410.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g01934.1 Score: 1

Zea mays

GRMZM2G013617_P01 Score: 1
GRMZM2G161961_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12624
Arabidopsis thaliana BLH4 (SAWTOOTH 2); DNA binding / transcription factor (BLH4) mRNA, complete cds /cds=p(261,2144) /gb=NM_179713
At.14305
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX820985
At.48946
Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds /cds=p(853,3072) /gb=AY050459
Hv.12894
HVSMEg0016O14f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0016O14f, mRNA sequence /clone=HVSMEg0016O14f /gb=BG344928
Mtr.7013
AC4843 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618467
Os.17301
Oryza sativa Japonica Group cDNA clone:J013134A07, full insert sequence /cds=p(231,1991) /gb=AK068029
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Os.50442
Oryza sativa Japonica Group cDNA clone:J023088C15, full insert sequence /gb=AK121207
Sbi.14265
HS1_50_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_50_B01_A012 5', mRNA sequence /clone=HS1_50_B01_A012 /clone_end=5' /gb=CD210350 /gi=30945366
Sbi.8687
GABR1_65_A02.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_65_A02_A002 3', mRNA sequence /clone=GABR1_65_A02_A002 /clone_end=3' /gb=CX622606 /gi=57821393

Domain Architecture

POX PF07526 4769352
DomainStartEndBit scoreE-value
POX129260202.51.2e-57
Homeobox3203783.30.0057

Sequences