Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4772032

Identification

Species:
Sorghum bicolor
Gene model
4772032
Description
estExt_Genewise1.C_120036
Family
CAMTA
3D structure (top 5)
1DCQ 1YYH 2RFM 1N11 2AJA
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

487754 Score: 1
919730 Score: 1

Sorghum bicolor

4772032 Score: 1
5050036 Score: 1

Oryza sativa subsp. japonica

LOC_Os10g22950.1 Score: 1

Physcomitrella patens

40635 Score: 1

Selaginella moellendorffii

441667 Score: 1

Zea mays

GRMZM2G038484_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.902
HVSMEk0022P07f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0022P07f, mRNA sequence /clone=HVSMEk0022P07f /gb=BG418518
Mtr.14133
EST611426 KVKC Medicago truncatula cDNA clone pKVKC-10B2, mRNA sequence /clone=pKVKC-10B2 /gb=BQ165557
Mtr.20634
METAO19TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY476154
Mtr.8266
s13dNF74E04MJ035_330910 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence /gb=CX534604
Os.13903
Oryza sativa Japonica Group cDNA clone:J013074G10, full insert sequence /gb=AK066651
Os.25048
Oryza sativa Japonica Group cDNA clone:J033041A20, full insert sequence /gb=AK101479
Os.49503
Oryza sativa (japonica cultivar-group) Os03g0388500 (Os03g0388500) mRNA, partial cds /cds=p(3,896) /gb=NM_001056800
Os.97411
OSJNEf08I05.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA clone OSJNEf08I05 5', mRNA sequence /clone=OSJNEf08I05 /clone_end=5' /gb=CB681818
Sbi.3744
PIC1_43_D12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325344
Sbi.5793
WOUND1_83_H11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_83_H11_A002 5', mRNA sequence /clone=WOUND1_83_H11_A002 /clone_end=5' /gb=CN152740 /gi=45997022

Domain Architecture

CG-1 PF03859 4772032
DomainStartEndBit scoreE-value
CG-1201382882.1e-83
Ank6476792.217
Ank68071235.42.2e-07
IQ84386324.70.00039
IQ86688628.92.1e-05

Sequences