Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4797633

Identification

Species:
Sorghum bicolor
Gene model
4797633
Description
e_gw1.3.18615.1
Family
C2H2
3D structure (top 5)
3GOY 2PQF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os01g57650.1 Score: 1

Vitis vinifera

GSVIVP00027440001 Score: 1

Zea mays

GRMZM2G105224_P01 Score: 1

Expression data

Expressed Sequence Tags

At.32113
Arabidopsis thaliana zinc finger (C2H2 type) family protein (AT4G27240) mRNA, complete cds /cds=p(198,1493) /gb=NM_118858
At.51570
Arabidopsis thaliana zinc finger (C2H2 type) family protein (AT1G11490) mRNA, complete cds /cds=p(1,1098) /gb=NM_101022
At.6919
Arabidopsis thaliana zinc finger protein-related (AT5G54630) mRNA, complete cds /cds=p(49,1467) /gb=NM_124844
Hv.11609
HX08N17w HX Hordeum vulgare subsp. vulgare cDNA clone HX08N17 3-PRIME, mRNA sequence /clone=HX08N17 /clone_end=3' /gb=CB875617
Os.37921
Oryza sativa Japonica Group cDNA clone:J023079O17, full insert sequence /cds=p(181,1638) /gb=AK071014
Os.50189
Oryza sativa Japonica Group cDNA clone:002-186-A10, full insert sequence /cds=p(197,1594) /gb=AK120010
Vvi.16007
WIN1122.C21_G21 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1122_G21 3', mRNA sequence /clone=WIN1122_G21 /clone_end=3' /gb=EC984613
Vvi.19258
WIN1125.C21_O04 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1125_O04 3', mRNA sequence /clone=WIN1125_O04 /clone_end=3' /gb=EC985799

Domain Architecture

zf-C2H2 PF00096 4797633
DomainStartEndBit scoreE-value
zf-C2H227329622.70.0015

Sequences