Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 481343

Identification

Species:
Arabidopsis lyrata
Gene model
481343
Description
fgenesh2_kg.4__403__AT2G24830.1
Family
C3H

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G24830.1 Score: 1

Carica papaya

evm.TU.supercontig_148.42 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g55000.1 Score: 1

Physcomitrella patens

177953 Score: 1

Populus trichocarpa

578310 Score: 1

Sorghum bicolor

4758267 Score: 1

Selaginella moellendorffii

171130 Score: 1

Vitis vinifera

GSVIVP00032809001 Score: 1

Zea mays

GRMZM2G017923_P01 Score: 1

Expression data

Expressed Sequence Tags

At.69630
Arabidopsis thaliana zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein (AT2G24830) mRNA, complete cds /cds=p(77,1570) /gb=NM_128042
Mtr.8462
EST1228153 MTY Medicago truncatula cDNA clone MTYBG05, mRNA sequence /clone=MTYBG05 /gb=DW019192
Os.81468
Oryza sativa Japonica Group cDNA clone:J023045J12, full insert sequence /gb=AK070242
Vvi.2550
WIN0543.C21_H05 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0543_H05 3', mRNA sequence /clone=WIN0543_H05 /clone_end=3' /gb=EC948028

Domain Architecture

zf-CCCH PF00642 481343
DomainStartEndBit scoreE-value
zf-CCCH13415922.50.0016
G-patch29734165.61.9e-16

Sequences