Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4823735

Identification

Species:
Sorghum bicolor
Gene model
4823735
Description
e_gw1.5.1204.1
Family
ARR-B
3D structure (top 5)
1K68 1XHF 3CFY 1DCF 2JK1
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.121
Arabidopsis thaliana ARR11 (RESPONSE REGULATOR 11); transcription factor/ two-component response regulator (ARR11) mRNA, complete cds /cds=p(240,1805) /gb=NM_105439
At.21955
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-13-O13 /cds=p(293,2287) /gb=AK176614
At.29298
Arabidopsis thaliana ARR18 (ARABIDOPSIS RESPONSE REGULATOR 18); transcription factor/ two-component response regulator (ARR18) mRNA, complete cds /cds=p(45,1901) /gb=NM_125193
Hv.10585
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf58b24, mRNA sequence /gb=AK248322
Os.5243
Oryza sativa Japonica Group cDNA clone:J013002L12, full insert sequence /gb=AK065276
Os.82062
AF53-Rpf_04_O22_T7_095.ab1 IRRI Drought Stress Panicle Library Oryza sativa (indica cultivar-group) cDNA clone C0001510 5' similar to unknown, mRNA sequence /clone=C0001510 /clone_end=5' /gb=CA764787
Os.87872
Oryza sativa (japonica cultivar-group) Os06g0183100 (Os06g0183100) mRNA, complete cds /cds=p(884,2974) /gb=NM_001063521
Ppa.9285
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_123034) mRNA, partial cds /cds=p(1,786) /gb=XM_001760314
Pth.6869
WS02536.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_J08 3', mRNA sequence /clone=WS02536_J08 /clone_end=3' /gb=DT488490

Domain Architecture

Response_reg PF00072 4823735
DomainStartEndBit scoreE-value
Response_reg12125107.25.7e-29
Myb_DNA-binding20025031.33.9e-06
G2-like2032501047.5e-31

Sequences