Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 482914

Identification

Species:
Arabidopsis lyrata
Gene model
482914
Description
fgenesh2_kg.4__1974__AT2G38950.1
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G38950.1 Score: 1

Coccomyxa sp. C-169

27437 Score: 1

Chlamydomonas reinhardtii

170309 Score: 1

Expression data

Expressed Sequence Tags

At.37227
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT2G38950) mRNA, complete cds /cds=p(181,2307) /gb=NM_129453

Domain Architecture

JmjN PF02375 482914
DomainStartEndBit scoreE-value
JmjN10914265.91.5e-16
JmjC321439155.41.8e-43
zf-C5HC254659987.16.4e-23

Sequences