Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4832

Identification

Species:
Selaginella moellendorffii
Gene model
4832
Description
gw1.10.43.1
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480295 Score: 1
899550 Score: 1

Arabidopsis thaliana

AT2G12646.1 Score: 1

Carica papaya

evm.TU.supercontig_30.116 Score: 1

Chlamydomonas reinhardtii

106059 Score: 1

Coccomyxa sp. C-169

20171 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g09070.1 Score: 1

Populus trichocarpa

583639 Score: 1
779642 Score: 0.927

Sorghum bicolor

4755537 Score: 1
5062069 Score: 1

Vitis vinifera

GSVIVP00030128001 Score: 1

Zea mays

GRMZM2G070295_P01 Score: 1

Expression data

Expressed Sequence Tags

At.47712
Arabidopsis thaliana clone asmbl_5324 unknown mRNA sequence /gb=EF182956
At.71353
Arabidopsis thaliana unknown protein (AT1G31040) mRNA, complete cds /cds=p(110,841) /gb=NM_102842
Os.8770
Oryza sativa Japonica Group cDNA clone:J033148H01, full insert sequence /cds=p(249,974) /gb=AK103838
Os.8903
Oryza sativa Japonica Group cDNA clone:J023090I20, full insert sequence /cds=p(149,934) /gb=AK111793
Pba.910
WS0255.B21_H09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_H09 3', mRNA sequence /clone=WS0255_H09 /clone_end=3' /gb=CV244729
Ppa.12983
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_228346) mRNA, partial cds /cds=p(911,1366) /gb=XM_001785899
Ppa.21442
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173318) mRNA, complete cds /cds=p(368,970) /gb=XM_001785021
Ppa.23620
CAYZ15572.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ15572 5', mRNA sequence /clone=CAYZ15572 /clone_end=5' /gb=FC385770
Pth.910
WS0255.B21_H09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_H09 3', mRNA sequence /clone=WS0255_H09 /clone_end=3' /gb=CV244729
Ptp.11954
T008B09 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830426
Vvi.20531
WIN0522.C21_J16 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0522_J16 3', mRNA sequence /clone=WIN0522_J16 /clone_end=3' /gb=EC941405
Vvi.20625
WIN0559.C21_F03 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0559_F03 3', mRNA sequence /clone=WIN0559_F03 /clone_end=3' /gb=EC953636

Domain Architecture

PLATZ PF04640 4832
DomainStartEndBit scoreE-value
PLATZ171272651.8e-76

Sequences