Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 484140

Identification

Species:
Arabidopsis lyrata
Gene model
484140
Description
fgenesh2_kg.5__132__AT2G02160.1
Family
C3H
3D structure (top 5)
2RPP 2E5S 3D2Q 3D2N 2CQE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G02160.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g58440.1 Score: 1

Populus trichocarpa

658643 Score: 1

Sorghum bicolor

4985725 Score: 1

Vitis vinifera

GSVIVP00021274001 Score: 1

Zea mays

GRMZM2G150262_P01 Score: 1

Expression data

Expressed Sequence Tags

At.22554
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G02160) mRNA, complete cds /cds=p(215,2224) /gb=NM_126276
At.72504
47-E8862-008-010-C14-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA clone MPIZp767C1410Q 5-PRIME, mRNA sequence /clone=MPIZp767C1410Q /clone_end=5' /gb=CB262789

Domain Architecture

zf-CCCH PF00642 484140
DomainStartEndBit scoreE-value
zf-CCCH30577.70.15
zf-CCCH61856.30.22
zf-CCCH11514019.90.0036

Sequences