Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 486694

Identification

Species:
Arabidopsis lyrata
Gene model
486694
Description
fgenesh2_kg.5__2686__AT3G61890.1
Family
HB
3D structure (top 5)
1AU7 2DMU 1ZQ3 3CMY 1FTT
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G61890.1 Score: 1

Carica papaya

evm.TU.supercontig_144.6 Score: 1

Sorghum bicolor

4827832 Score: 1

Zea mays

GRMZM2G117164_P01 Score: 1

Expression data

Expressed Sequence Tags

At.136
Arabidopsis thaliana ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription factor (ATHB-7) mRNA, complete cds /cds=p(177,953) /gb=NM_130233
At.25517
Arabidopsis thaliana ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12); transcription factor (ATHB-12) mRNA, complete cds /cds=p(87,794) /gb=NM_116054
Mtr.12349
METAI06TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY475591

Domain Architecture

Homeobox PF00046 486694
DomainStartEndBit scoreE-value
Homeobox318554.93e-13
HALZ8613037.26.7e-08

Sequences