Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 486980

Identification

Species:
Arabidopsis lyrata
Gene model
486980
Description
fgenesh2_kg.6__114__AT5G02030.1
Family
HB
3D structure (top 5)
2DMN 1PUF 1B72 1DU6 1X2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G02030.1 Score: 1

Carica papaya

evm.TU.supercontig_56.43 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g38120.1 Score: 1

Sorghum bicolor

4807299 Score: 1

Vitis vinifera

GSVIVP00021404001 Score: 1

Zea mays

GRMZM2G074645_P01 Score: 1
GRMZM2G173509_P01 Score: 1

Expression data

Expressed Sequence Tags

At.4802
Arabidopsis thaliana LSN (LARSON); DNA binding / transcription factor (LSN) mRNA, complete cds /cds=p(121,1848) /gb=NM_120281
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Vvi.599
CAbud0006_IVF_D11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IVF_D11 5', mRNA sequence /clone=CAbud0006_IVF_D11 /clone_end=5' /gb=CF514422

Domain Architecture

POX PF07526 486980
DomainStartEndBit scoreE-value
POX169292242.21.3e-69
Homeobox3494075.40.0035

Sequences