Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4872111

Identification

Species:
Sorghum bicolor
Gene model
4872111
Description
estExt_Genewise1Plus.C_chr_111085
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4152567 Score: 1
4872111 Score: 1

Carica papaya

evm.TU.supercontig_36.110 Score: 1
evm.TU.supercontig_996.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g09170.1 Score: 1

Physcomitrella patens

182268 Score: 1

Zea mays

GRMZM2G113060_P01 Score: 1
GRMZM2G160050_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.29945
HVSMEg0006K15f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0006K15f, mRNA sequence /clone=HVSMEg0006K15f /gb=BG343755
Os.20162
Oryza sativa Japonica Group cDNA, clone: J065128M14, full insert sequence /gb=AK287694
Os.27803
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120K06, full insert sequence /gb=CT829047
Os.28117
Oryza sativa Japonica Group cDNA, clone: J075147D24, full insert sequence /gb=AK242121
Pba.6376
WS02543.B21_L09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_L09 3', mRNA sequence /clone=WS02543_L09 /clone_end=3' /gb=DT489979
Pth.6376
WS02543.B21_L09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_L09 3', mRNA sequence /clone=WS02543_L09 /clone_end=3' /gb=DT489979
Sbi.9468
GABR1_20_E01.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_20_E01_A002 5', mRNA sequence /clone=GABR1_20_E01_A002 /clone_end=5' /gb=CX615527 /gi=57814314

Domain Architecture

AP2 PF00847 4872111
DomainStartEndBit scoreE-value
AP212517680.46.4e-21

Sequences