Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 487583

Identification

Species:
Arabidopsis lyrata
Gene model
487583
Description
fgenesh2_kg.6__717__AT5G07500.1
Family
C3H
3D structure (top 5)
3D2Q 2E5S 2RPP 1M9O 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G07500.1 Score: 1

Carica papaya

evm.TU.supercontig_13.232 Score: 1

Vitis vinifera

GSVIVP00014226001 Score: 1

Expression data

Expressed Sequence Tags

At.4530
Arabidopsis thaliana unknown protein (At4g29190) mRNA, complete cds /cds=p(67,1137) /gb=AY045970
At.5234
Arabidopsis thaliana zinc finger transcription factor (PEI1) mRNA, complete cds /cds=p(97,834) /gb=AF050463
Vvi.1914
WIN083.C21_J15 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN083_J15 3', mRNA sequence /clone=WIN083_J15 /clone_end=3' /gb=EC960443

Domain Architecture

zf-CCCH PF00642 487583
DomainStartEndBit scoreE-value
zf-CCCH9411925.30.00025

Sequences