Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4876092

Identification

Species:
Sorghum bicolor
Gene model
4876092
Description
estExt_Genewise1Plus.C_chr_29868
Family
C3H
3D structure (top 5)
2F8Y 1OY3 2FO1 1IKN 1S70
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os07g38090.1 Score: 1
LOC_Os07g38090.2 Score: 1

Expression data

Expressed Sequence Tags

Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Hv.9387
HVSMEb0001B23f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0001B23f, mRNA sequence /clone=HVSMEb0001B23f /gb=BF626703
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Os.14948
Oryza sativa Japonica Group cDNA clone:J013123G12, full insert sequence /cds=p(251,2224) /gb=AK067895
Vvi.19078
VV_PEd01a07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241477

Domain Architecture

Ank PF00023 4876092
DomainStartEndBit scoreE-value
Ank76109220.0025
Ank11114633.49.3e-07
zf-CCCH28230833.39.7e-07
zf-CCCH3183401.80.89

Sequences