Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4876507

Identification

Species:
Sorghum bicolor
Gene model
4876507
Description
estExt_Genewise1Plus.C_chr_210496
Family
CAMTA
3D structure (top 5)
1N11 3F6Q 1YYH 2VGE 2F8Y
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas sp. RCC299

59779 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g43030.1 Score: 1

Expression data

Expressed Sequence Tags

Hv.3825
AL502963 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW09E18u 3', mRNA sequence /clone=HW09E18 /clone_end=3' /gb=AL502963
Hv.902
HVSMEk0022P07f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0022P07f, mRNA sequence /clone=HVSMEk0022P07f /gb=BG418518
Mtr.20634
METAO19TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY476154
Mtr.8266
s13dNF74E04MJ035_330910 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence /gb=CX534604
Os.13903
Oryza sativa Japonica Group cDNA clone:J013074G10, full insert sequence /gb=AK066651
Os.25048
Oryza sativa Japonica Group cDNA clone:J033041A20, full insert sequence /gb=AK101479
Os.49503
Oryza sativa (japonica cultivar-group) Os03g0388500 (Os03g0388500) mRNA, partial cds /cds=p(3,896) /gb=NM_001056800
Os.97411
OSJNEf08I05.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA clone OSJNEf08I05 5', mRNA sequence /clone=OSJNEf08I05 /clone_end=5' /gb=CB681818
Sbi.16208
PIC1_43_D12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM329798
Sbi.3744
PIC1_43_D12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325344

Domain Architecture

CG-1 PF03859 4876507
DomainStartEndBit scoreE-value
CG-119137295.31.3e-85
Ank6506823.412
Ank68371526.79.4e-05
Ank7227564.29.2
IQ85987922.10.0023
IQ88290230.85.6e-06

Sequences