Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4884146

Identification

Species:
Sorghum bicolor
Gene model
4884146
Description
estExt_Genewise1Plus.C_chr_47823
Family
C3H
3D structure (top 5)
2D9N 2RHK 2E5S 2RPP 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Zea mays

GRMZM2G098715_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.5250
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf156g01, mRNA sequence /gb=AK248188
Os.26343
Oryza sativa Japonica Group cDNA clone:J013045F22, full insert sequence /cds=p(224,1330) /gb=AK120250
Pba.8620
WS02524.BR_J20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_J20 5', mRNA sequence /clone=WS02524_J20 /clone_end=5' /gb=DT479048
Pth.17392
Populus trichocarpa clone PX0011_J15 unknown mRNA /cds=p(416,745) /gb=EF144239
Pth.8620
WS02524.BR_J20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_J20 5', mRNA sequence /clone=WS02524_J20 /clone_end=5' /gb=DT479048
Sbi.13071
POL1_27_F06.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_27_F06_A002 5', mRNA sequence /clone=POL1_27_F06_A002 /clone_end=5' /gb=CF484831 /gi=34513700

Domain Architecture

zf-CCCH PF00642 4884146
DomainStartEndBit scoreE-value
zf-CCCH227130.029
zf-CCCH305520.40.0031
zf-CCCH1451708.40.12
zf-C3HC4213270292e-05
zf-CCCH3013287.40.16

Sequences