Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 488738

Identification

Species:
Arabidopsis lyrata
Gene model
488738
Description
fgenesh2_kg.6__1872__AT5G18550.1
Family
C3H
3D structure (top 5)
1M9O 2E5S 2RPP 2CQE 2D9N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G18550.1 Score: 1

Expression data

Expressed Sequence Tags

At.22535
Arabidopsis thaliana nucleic acid binding (AT5G18550) mRNA, complete cds /cds=p(338,1735) /gb=NM_121860
At.27771
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-11-O09 /cds=p(267,1655) /gb=AK230312
Mtr.10686
EST647280 HOGA Medicago truncatula cDNA clone HOGA-31I22, mRNA sequence /clone=HOGA-31I22 /gb=CB894488

Domain Architecture

zf-CCCH PF00642 488738
DomainStartEndBit scoreE-value
zf-CCCH527846.41.1e-10
zf-CCCH9812446.41.1e-10
zf-CCCH14717345.42.2e-10
zf-CCCH30132748.82.2e-11
zf-CCCH34637240.75.8e-09

Sequences