Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 489637

Identification

Species:
Arabidopsis lyrata
Gene model
489637
Description
fgenesh2_kg.6__2771__AT5G28040.1
Family
GeBP

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G28040.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g25430.1 Score: 1

Arabidopsis lyrata

477768 Score: 1
489637 Score: 1

Populus trichocarpa

650024 Score: 1
752281 Score: 1

Sorghum bicolor

5001673 Score: 1
5035210 Score: 0.962

Vitis vinifera

GSVIVP00031117001 Score: 1

Arabidopsis lyrata

477768 Score: 1
489637 Score: 1

Zea mays

GRMZM2G049899_P01 Score: 1
GRMZM2G075122_P01 Score: 1
GRMZM2G082318_P01 Score: 1
GRMZM2G147515_P01 Score: 1

Expression data

Expressed Sequence Tags

At.17642
Arabidopsis thaliana transcription regulator (AT3G04930) mRNA, complete cds /cds=p(116,1486) /gb=NM_111365
At.30768
Arabidopsis thaliana At5g28040 mRNA for unknown protein, complete cds, clone: RAFL19-20-B12 /cds=p(65,1348) /gb=AK117998

Domain Architecture

DUF573 PF04504 489637
DomainStartEndBit scoreE-value
DUF573125224186.76.6e-53

Sequences