Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 490909

Identification

Species:
Arabidopsis lyrata
Gene model
490909
Description
fgenesh2_kg.7__342__AT4G36988.1
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT4G36990.1 Score: 1

Carica papaya

evm.TU.supercontig_55.149 Score: 1

Populus trichocarpa

218690 Score: 1

Vitis vinifera

GSVIVP00019488001 Score: 1

Zea mays

GRMZM2G002131_P01 Score: 1
GRMZM2G143073_P01 Score: 1

Expression data

Expressed Sequence Tags

At.5365
Arabidopsis thaliana HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor (HSF4) mRNA, complete cds /cds=p(484,1338) /gb=NM_119862
Os.50642
Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds /cds=p(122,988) /gb=AY344483

Domain Architecture

HSF_DNA-bind PF00447 490909
DomainStartEndBit scoreE-value
HSF_DNA-bind12205176.38.5e-50

Sequences