Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 494588

Identification

Species:
Arabidopsis lyrata
Gene model
494588
Description
fgenesh2_kg.8__404__AT5G44080.1
Family
bZIP
3D structure (top 5)
1HJB 1GU4 1FOS 1T2K 1A02
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G44080.1 Score: 1

Carica papaya

evm.TU.supercontig_21.201 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g64730.1 Score: 1

Populus trichocarpa

651568 Score: 1

Vitis vinifera

GSVIVP00031758001 Score: 1

Expression data

Expressed Sequence Tags

At.26664
Arabidopsis thaliana mRNA for G-box binding bZip transcription factor GBF4 / AtbZip40, complete cds, clone: RAFL15-22-N05 /cds=p(131,943) /gb=AK228531
At.43607
Arabidopsis thaliana clone 25211 mRNA, complete sequence /cds=p(141,1088) /gb=AY086457
At.71149
Arabidopsis thaliana ATPCS2 (PHYTOCHELATIN SYNTHASE 2); glutathione gamma-glutamylcysteinyltransferase (ATPCS2) mRNA, complete cds /cds=p(238,1596) /gb=NM_100279

Domain Architecture

bZIP_1 PF00170 494588
DomainStartEndBit scoreE-value
bZIP_122328660.75.7e-15
bZIP_2223277409.3e-09

Sequences