Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 494795

Identification

Species:
Arabidopsis lyrata
Gene model
494795
Description
fgenesh2_kg.8__611__AT5G42400.1
Family
SET
3D structure (top 5)
3H6L 2W5Y 2R3A 1ML9 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G42400.1 Score: 1

Carica papaya

evm.TU.supercontig_36.84 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g41900.1 Score: 1

Populus trichocarpa

753829 Score: 1

Sorghum bicolor

5044461 Score: 1

Expression data

Expressed Sequence Tags

At.30177
Arabidopsis thaliana SET domain-containing protein (TXR7) (AT5G42400) mRNA, complete cds /cds=p(1,4272) /gb=NM_123605
Os.8820
Oryza sativa Japonica Group cDNA clone:J013139B12, full insert sequence /gb=AK068250

Domain Architecture

SET PF00856 494795
DomainStartEndBit scoreE-value
SET12461376193.36.5e-55

Sequences