Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4970783

Identification

Species:
Sorghum bicolor
Gene model
4970783
Description
fgenesh1_pg.C_chr_2002099
Family
bHLH
3D structure (top 5)
1AM9 1NKP 1HLO 1NLW 1A0A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

476008 Score: 1

Arabidopsis thaliana

AT1G68810.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g24490.1 Score: 1

Populus trichocarpa

766018 Score: 1
769699 Score: 1

Zea mays

GRMZM2G176141_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.54743
Oryza sativa Japonica Group cDNA clone:002-113-F07, full insert sequence /gb=AK106649
Os.56209
Oryza sativa Japonica Group cDNA clone:002-137-H01, full insert sequence /cds=p(216,1253) /gb=AK109616
Os.75856
Oryza sativa (japonica cultivar-group) Os09g0410700 (Os09g0410700) mRNA, complete cds /cds=p(1,1092) /gb=NM_001069685

Domain Architecture

HLH PF00010 4970783
DomainStartEndBit scoreE-value
HLH11516450.85.2e-12

Sequences