Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 497511

Identification

Species:
Arabidopsis lyrata
Gene model
497511
Description
fgenesh2_kg.666__2__AT5G65310.1
Family
HB
3D structure (top 5)
1NK2 2E1O 2CUE 2DMS 2R5Y
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G65310.1 Score: 1

Arabidopsis lyrata

496765 Score: 1
497511 Score: 1

Physcomitrella patens

6992 Score: 1

Expression data

Expressed Sequence Tags

At.19698
Arabidopsis thaliana putative homeobox-leucine zipper protein ATHB-5 (At5g65310) mRNA, complete cds /cds=p(398,1336) /gb=AY074293
Hv.12185
BES1824102g23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010G232 5-PRIME, mRNA sequence /clone=MPMGp2010G23102 /clone_end=5' /gb=CK122216
Pba.9592
WS02549.C21_O11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_O11 3', mRNA sequence /clone=WS02549_O11 /clone_end=3' /gb=DT492190
Pth.12047
M112B12.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone M112B12 5', mRNA sequence /clone=M112B12 /clone_end=5' /gb=DN494600
Pth.12518
WS01224.B21.1_M07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01224_M07 3', mRNA sequence /clone=WS01224_M07 /clone_end=3' /gb=CV236620

Domain Architecture

Homeobox PF00046 497511
DomainStartEndBit scoreE-value
Homeobox7212673.67e-19
HALZ12717174.63.7e-19

Sequences