Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4979759

Identification

Species:
Sorghum bicolor
Gene model
4979759
Description
fgenesh1_pg.C_chr_4002592
Family
bHLH
3D structure (top 5)
1NKP 1AM9 1HLO 1A0A 1MDY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g48060.1 Score: 1

Zea mays

GRMZM2G070269_P01 Score: 1

Expression data

Expressed Sequence Tags

At.35765
Arabidopsis thaliana unknown protein (At1g66470) mRNA, complete cds /cds=p(114,1010) /gb=AY128310
At.55195
Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein (AT5G37800) mRNA, complete cds /cds=p(1,924) /gb=NM_123139
Os.30617
Oryza sativa Japonica Group cDNA clone:002-146-B03, full insert sequence /cds=p(212,1099) /gb=AK108587
Os.56232
Oryza sativa Japonica Group cDNA clone:002-143-H06, full insert sequence /cds=p(148,1050) /gb=AK109662

Domain Architecture

HLH PF00010 4979759
DomainStartEndBit scoreE-value
HLH21626333.58.4e-07

Sequences