Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4984953

Identification

Species:
Sorghum bicolor
Gene model
4984953
Description
fgenesh1_pg.C_chr_6001840
Family
bHLH
3D structure (top 5)
1NKP 1AM9 1HLO 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.27189
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf45m21, mRNA sequence /gb=AK249503
Hv.30821
HX04H02r HX Hordeum vulgare subsp. vulgare cDNA clone HX04H02 5-PRIME, mRNA sequence /clone=HX04H02 /clone_end=5' /gb=BQ470921
Mtr.17547
EST530048 GPOD Medicago truncatula cDNA clone pGPOD-7O4 5' end, mRNA sequence /clone=pGPOD-7O4 /clone_end=5' /gb=BI308638
Os.2233
Oryza sativa transcriptional activator (Ra) mRNA, complete cds /cds=p(456,2216) /gb=U39860
Os.49810
Oryza sativa Japonica Group cDNA clone:J023013E24, full insert sequence /cds=p(137,1816) /gb=AK111704
Os.57542
Oryza sativa Plw-OSB2 mRNA for R-type basic helix-loop-helix protein, complete cds /cds=p(55,1410) /gb=AB021080
Os.79112
Oryza sativa (japonica cultivar-group) Os01g0576100 (Os01g0576100) mRNA, complete cds /cds=p(1,786) /gb=NM_001049926
Vvi.9952
Vitis vinifera myc anthocyanin regulatory protein (MYCA1) mRNA, complete cds /cds=p(1,1965) /gb=EF193002

Domain Architecture

HLH PF00010 4984953
DomainStartEndBit scoreE-value
HLH38243654.93e-13

Sequences