Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4985725

Identification

Species:
Sorghum bicolor
Gene model
4985725
Description
fgenesh1_pg.C_chr_6002612
Family
C3H
3D structure (top 5)
2RPP 3D2Q 2E5S 3D2N 2D9N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484140 Score: 1

Arabidopsis thaliana

AT2G02160.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g57600.1 Score: 1

Populus trichocarpa

657068 Score: 1

Selaginella moellendorffii

441325 Score: 1

Vitis vinifera

GSVIVP00021274001 Score: 1

Zea mays

GRMZM2G150262_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.12216
Oryza sativa Japonica Group cDNA clone:J023066C11, full insert sequence /gb=AK070857
Sbi.10603
WS1_72_G12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA sequence /gb=AW924759

Domain Architecture

zf-CCCH PF00642 4985725
DomainStartEndBit scoreE-value
zf-CCCH255211.90.04
zf-CCCH568070.18
zf-CCCH10613128.52.8e-05

Sequences