Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4987640

Identification

Species:
Sorghum bicolor
Gene model
4987640
Description
fgenesh1_pg.C_chr_7001730
Family
C2H2
3D structure (top 5)
2DLQ 2I13 1TF6 2RPC 2GLI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

326585 Score: 1

Arabidopsis thaliana

AT5G22890.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g44830.1 Score: 1

Expression data

Expressed Sequence Tags

At.64018
Arabidopsis thaliana STOP1 (SENSITIVE TO PROTON RHIZOTOXICITY 1); nucleic acid binding / transcription factor/ zinc ion binding (STOP1) mRNA, complete cds /cds=p(189,1688) /gb=NM_179415
Hv.21079
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf151p02, mRNA sequence /gb=AK252406
Os.51657
Oryza sativa Japonica Group cDNA clone:001-113-E02, full insert sequence /gb=AK063290
Os.5755
Oryza sativa Japonica Group cDNA clone:J023088A12, full insert sequence /gb=AK071320
Os.75821
Oryza sativa Japonica Group cDNA, clone: J065055P16, full insert sequence /gb=AK287605
Os.76617
Oryza sativa Japonica Group cDNA, clone: J100051N01, full insert sequence /gb=AK243285
Os.8796
Oryza sativa Japonica Group cDNA clone:J023123F03, full insert sequence /cds=p(1944,3512) /gb=AK100840

Domain Architecture

zf-C2H2 PF00096 4987640
DomainStartEndBit scoreE-value
zf-C2H222124331.73.1e-06

Sequences