Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 4998721

Identification

Species:
Sorghum bicolor
Gene model
4998721
Description
estExt_fgenesh1_pg.C_chr_14575
Family
HB
3D structure (top 5)
1B72 1B8I 1NK2 2E1O 2CUE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os03g08960.1 Score: 1

Zea mays

GRMZM2G075740_P01 Score: 1
GRMZM2G075740_P02 Score: 1
GRMZM2G132367_P01 Score: 1
GRMZM2G132367_P02 Score: 1

Expression data

Expressed Sequence Tags

Os.2364
Oryza sativa Japonica Group cDNA clone:001-127-B05, full insert sequence /gb=AK105484
Os.38013
Oryza sativa Japonica Group cDNA clone:J033046N04, full insert sequence /cds=p(287,1222) /gb=AK101522
Sbi.9105
ANR1_6_B09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_6_B09_A002 3', mRNA sequence /clone=ANR1_6_B09_A002 /clone_end=3' /gb=CX606983 /gi=57805046

Domain Architecture

Homeobox PF00046 4998721
DomainStartEndBit scoreE-value
Homeobox7012471.92.3e-18
HALZ12516940.75.9e-09

Sequences