Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5000037

Identification

Species:
Sorghum bicolor
Gene model
5000037
Description
estExt_fgenesh1_pg.C_chr_22307
Family
bHLH
3D structure (top 5)
1AM9 1NKP 1HLO 1MDY 1NLW
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os09g28210.1 Score: 1

Populus trichocarpa

655137 Score: 1

Zea mays

GRMZM2G114382_P01 Score: 1

Expression data

Expressed Sequence Tags

At.28829
Arabidopsis thaliana mRNA for putative bHLH transcription factor, complete cds, clone: RAFL16-24-D23 /cds=p(149,874) /gb=AK228927
At.35505
Arabidopsis thaliana mRNA for putative bHLH transcription factor (bHLH037), complete cds, clone: RAFL22-72-P15 /cds=p(190,885) /gb=AK176020
Os.51063
Oryza sativa Japonica Group cDNA clone:J023048E05, full insert sequence /cds=p(176,886) /gb=AK070458

Domain Architecture

HLH PF00010 5000037
DomainStartEndBit scoreE-value
HLH175222309.5e-06

Sequences