Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5001803

Identification

Species:
Sorghum bicolor
Gene model
5001803
Description
estExt_fgenesh1_pg.C_chr_31272
Family
bHLH
3D structure (top 5)
1AM9 1HLO 1MDY 1NKP 1A0A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

471048 Score: 1

Arabidopsis thaliana

AT1G09530.1 Score: 1
AT1G09530.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g18290.1 Score: 1

Populus trichocarpa

581594 Score: 1

Vitis vinifera

GSVIVP00022506001 Score: 1

Zea mays

GRMZM2G115960_P03 Score: 1

Expression data

Expressed Sequence Tags

Os.27705
Oryza sativa Japonica Group cDNA clone:J033088H11, full insert sequence /cds=p(285,2198) /gb=AK102252
Os.97162
Oryza sativa Japonica Group cDNA clone:002-176-G11, full insert sequence /gb=AK111156
Sbi.12311
WOUND1_52_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_52_G01_A002 5', mRNA sequence /clone=WOUND1_52_G01_A002 /clone_end=5' /gb=CN147872 /gi=45988699

Domain Architecture

HLH PF00010 5001803
DomainStartEndBit scoreE-value
HLH43248160.56.2e-15

Sequences