Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5002027

Identification

Species:
Sorghum bicolor
Gene model
5002027
Description
estExt_fgenesh1_pg.C_chr_31892
Family
bHLH
3D structure (top 5)
1HLO 1AM9 1MDY 1NKP 1A0A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os01g38610.1 Score: 1

Zea mays

GRMZM2G104777_P01 Score: 1
GRMZM2G164341_P01 Score: 1

Expression data

Expressed Sequence Tags

At.38078
Arabidopsis thaliana clone RAFL16-03-H17 (R50113) unknown protein (At3g21330) mRNA, complete cds /cds=p(348,1469) /gb=BT004279
Hv.30058
HV_CEa0006N02f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0006N02f, mRNA sequence /clone=HV_CEa0006N02f /gb=BF263465
Os.21231
Oryza sativa (japonica cultivar-group) Os01g0566800 (Os01g0566800) mRNA, complete cds /cds=p(1,1455) /gb=NM_001049899
Os.25546
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI223P22, full insert sequence /gb=CT831219
Os.81759
OSJNEd07C07.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA clone OSJNEd07C07 3', mRNA sequence /clone=OSJNEd07C07 /clone_end=3' /gb=CB662792

Domain Architecture

HLH PF00010 5002027
DomainStartEndBit scoreE-value
HLH35640328.23.4e-05

Sequences