Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5002040

Identification

Species:
Sorghum bicolor
Gene model
5002040
Description
estExt_fgenesh1_pg.C_chr_31917
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os01g39020.1 Score: 1

Zea mays

GRMZM2G005815_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Os.51916
Oryza sativa Japonica Group cDNA clone:002-105-E08, full insert sequence /gb=AK064271
Os.80361
Oryza sativa (japonica cultivar-group) Os06g0565200 (Os06g0565200) mRNA, complete cds /cds=p(1,996) /gb=NM_001064424
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 5002040
DomainStartEndBit scoreE-value
HSF_DNA-bind40210188.61.7e-53

Sequences