Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5002432

Identification

Species:
Sorghum bicolor
Gene model
5002432
Description
estExt_fgenesh1_pg.C_chr_32661
Family
bHLH
3D structure (top 5)
1NKP 1AM9 1HLO 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os01g50940.1 Score: 1

Zea mays

GRMZM2G159937_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.20568
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf144n21, mRNA sequence /gb=AK252240
Os.41914
Oryza sativa Japonica Group cDNA clone:J013000P16, full insert sequence /gb=AK064946
Os.45983
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA221E23, full insert sequence /gb=CT833046
Pba.10315
WS02531.BR_G12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_G12 5', mRNA sequence /clone=WS02531_G12 /clone_end=5' /gb=DT481271
Pth.10315
WS02531.BR_G12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_G12 5', mRNA sequence /clone=WS02531_G12 /clone_end=5' /gb=DT481271

Domain Architecture

HLH PF00010 5002432
DomainStartEndBit scoreE-value
HLH33438349.21.6e-11

Sequences