Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5003074

Identification

Species:
Sorghum bicolor
Gene model
5003074
Description
estExt_fgenesh1_pg.C_chr_33753
Family
bHLH
3D structure (top 5)
1AM9 1HLO 1NKP 1NLW 2QL2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470588 Score: 1

Arabidopsis thaliana

AT1G05805.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g67480.1 Score: 1

Vitis vinifera

GSVIVP00005670001 Score: 1

Zea mays

GRMZM2G064071_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.9305
BJ459198 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak36b11 3', mRNA sequence /clone=baak36b11 /clone_end=3' /gb=BJ459198
Sbi.5326
NIT1_32_F11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA clone NIT1_32_F11_A002 5', mRNA sequence /clone=NIT1_32_F11_A002 /clone_end=5' /gb=CF434227 /gi=34446928
Vvi.13943
WIN0564.C21_E19 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0564_E19 3', mRNA sequence /clone=WIN0564_E19 /clone_end=3' /gb=EC955297

Domain Architecture

HLH PF00010 5003074
DomainStartEndBit scoreE-value
HLH29033838.52.7e-08

Sequences