Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5006711

Identification

Species:
Sorghum bicolor
Gene model
5006711
Description
estExt_fgenesh1_pg.C_chr_61780
Family
C2H2
3D structure (top 5)
1TF6 2I13 2JP9 1A1H 2GLI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os04g46680.1 Score: 1

Physcomitrella patens

17198 Score: 1
6092 Score: 1

Sorghum bicolor

5006711 Score: 1
5044261 Score: 1

Sorghum bicolor

4980021 Score: 1
5006711 Score: 1

Populus trichocarpa

589863 Score: 1
755135 Score: 1

Zea mays

GRMZM2G170520_P01 Score: 1

Expression data

Expressed Sequence Tags

Os.50594
Oryza sativa Japonica Group cDNA clone:J033109L03, full insert sequence /cds=p(79,1014) /gb=AK121993
Os.52090
Oryza sativa (japonica cultivar-group) Os02g0659500 (Os02g0659500) mRNA, complete cds /cds=p(131,1156) /gb=NM_001054176
Sbi.13947
POL1_65_D05.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_65_D05_A002 5', mRNA sequence /clone=POL1_65_D05_A002 /clone_end=5' /gb=CF480413 /gi=34509282

Domain Architecture

zf-C2H2 PF00096 5006711
DomainStartEndBit scoreE-value
zf-C2H242619.60.013
zf-C2H225327519.30.016

Sequences