Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5009769

Identification

Species:
Sorghum bicolor
Gene model
5009769
Description
estExt_fgenesh1_pg.C_chr_91612
Family
HB
3D structure (top 5)
2DMN 1B72 1DU6 1PUF 1X2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_56.43 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g38120.1 Score: 1

Vitis vinifera

GSVIVP00021404001 Score: 1

Zea mays

GRMZM2G125976_P01 Score: 1

Expression data

Expressed Sequence Tags

At.23033
Arabidopsis thaliana BLH1 (embryo sac development arrest 29) (BLH1) mRNA, complete cds /cds=p(544,2586) /gb=NM_001036413
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Mtr.22349
META209TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474128
Os.19639
Oryza sativa Indica Group mRNA for qSH-1, complete cds /cds=p(450,2288) /gb=AB071330
Os.27308
Oryza sativa Japonica Group cDNA clone:J023133E06, full insert sequence /cds=p(320,2062) /gb=AK100916

Domain Architecture

POX PF07526 5009769
DomainStartEndBit scoreE-value
POX141276195.21.8e-55
Homeobox3243829.10.0015

Sequences