Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5032111

Identification

Species:
Sorghum bicolor
Gene model
5032111
Description
Sb10g027200
Family
C3H
3D structure (top 5)
2YU6 2YUD 2E5S 2RHK 2D9N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

890588 Score: 1

Arabidopsis thaliana

AT1G30460.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g46400.1 Score: 1

Populus trichocarpa

753193 Score: 1

Vitis vinifera

GSVIVP00028411001 Score: 1

Expression data

Expressed Sequence Tags

At.40546
Arabidopsis thaliana ATCPSF30/CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding (ATCPSF30/CPSF30) mRNA, complete cds /cds=p(80,1975) /gb=NM_102782
Os.68827
Oryza sativa (japonica cultivar-group) Os06g0677700 (Os06g0677700) mRNA, complete cds /cds=p(1,1998) /gb=NM_001064894

Domain Architecture

zf-CCCH PF00642 5032111
DomainStartEndBit scoreE-value
zf-CCCH578220.40.003
zf-CCCH8511012.50.034
zf-CCCH11113622.30.0017
YTH289383139.21.3e-38

Sequences