Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 5032967

Identification

Species:
Sorghum bicolor
Gene model
5032967
Description
Sb02g007900
Family
TRAF
3D structure (top 5)
2PPI 1R29 2VKP 2IF5 2Z8H
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

489752 Score: 1

Arabidopsis thaliana

AT4G08455.1 Score: 1

Carica papaya

evm.TU.supercontig_64.150 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g15490.1 Score: 1

Populus trichocarpa

830168 Score: 1

Selaginella moellendorffii

58268 Score: 1

Zea mays

GRMZM2G109738_P01 Score: 1
GRMZM2G128623_P01 Score: 1

Expression data

Expressed Sequence Tags

At.50326
Arabidopsis thaliana BTB/POZ domain-containing protein (AT4G08455) mRNA, complete cds /cds=p(18,749) /gb=NM_148294
Hv.1150
RUS13E12w HA Hordeum vulgare subsp. vulgare cDNA clone HA14H16, mRNA sequence /clone=HA14H16 /gb=FD520081
Mtr.8078
METBB65TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY478226
Os.18530
Oryza sativa Japonica Group cDNA clone:J023015F07, full insert sequence /cds=p(100,840) /gb=AK069407
Pba.7522
WS02530.BR_G14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_G14 5', mRNA sequence /clone=WS02530_G14 /clone_end=5' /gb=DT480940
Pth.7522
WS02530.BR_G14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_G14 5', mRNA sequence /clone=WS02530_G14 /clone_end=5' /gb=DT480940
Vvi.2781
VV_PEd0012e02.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV240410

Domain Architecture

BTB PF00651 5032967
DomainStartEndBit scoreE-value
BTB5317871.62.9e-18

Sequences